Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.35■□□□□ 0.21
Q8VDP2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Q8VDP2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Q8VDP2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Q8VDP2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Q8VDP2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Q8VDP2 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.34■□□□□ 0.21
Q8VDP2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.34■□□□□ 0.21
Q8VDP2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Q8VDP2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.34■□□□□ 0.21
Q8VDP2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Q8VDP2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Q8VDP2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
Q8VDP2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q8VDP2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q8VDP2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q8VDP2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q8VDP2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Q8VDP2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Q8VDP2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.33■□□□□ 0.2
Q8VDP2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.33■□□□□ 0.2
Q8VDP2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q8VDP2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q8VDP2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Q8VDP2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Q8VDP2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.33■□□□□ 0.2
Q8VDP2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q8VDP2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.32■□□□□ 0.2
Q8VDP2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.32■□□□□ 0.2
Q8VDP2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.32■□□□□ 0.2
Q8VDP2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.32■□□□□ 0.2
Q8VDP2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q8VDP2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Q8VDP2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q8VDP2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Spcs1-204ENSMUST00000226782 949 ntBASIC16.31■□□□□ 0.2
Q8VDP2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q8VDP2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q8VDP2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms