Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3kbp1Q8R550 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.21■□□□□ 0.34
Sh3kbp1Q8R550 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gm29518-201ENSMUST00000190858 372 ntBASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gm10566-201ENSMUST00000086739 996 ntBASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3kbp1Q8R550 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Gm9013-201ENSMUST00000132939 882 ntBASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Gm27704-201ENSMUST00000185094 107 ntBASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3kbp1Q8R550 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3kbp1Q8R550 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sh3kbp1Q8R550 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms