Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Top1mtQ8R4U6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Top1mtQ8R4U6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Top1mtQ8R4U6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Mir5130-201ENSMUST00000175160 84 ntBASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Top1mtQ8R4U6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Gm45058-201ENSMUST00000205810 766 ntBASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Gm18959-201ENSMUST00000208954 655 ntBASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Top1mtQ8R4U6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Top1mtQ8R4U6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Top1mtQ8R4U6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Gm18115-201ENSMUST00000221209 621 ntBASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Top1mtQ8R4U6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Gm6433-201ENSMUST00000118634 875 ntBASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms