Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Mir5133-201ENSMUST00000174955 77 ntBASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup35Q8R4R6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Gm26571-201ENSMUST00000181399 666 ntBASIC13.63□□□□□ -0.23
Nup35Q8R4R6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.63□□□□□ -0.23
Nup35Q8R4R6 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Dio3-201ENSMUST00000097228 1449 ntBASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup35Q8R4R6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup35Q8R4R6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms