Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Gm13474-201ENSMUST00000122466 815 ntBASIC17.13■□□□□ 0.33
Nup85Q8R480 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Gm18958-201ENSMUST00000174258 762 ntBASIC17.13■□□□□ 0.33
Nup85Q8R480 Gm23634-201ENSMUST00000175071 91 ntBASIC17.13■□□□□ 0.33
Nup85Q8R480 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nup85Q8R480 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.12■□□□□ 0.33
Nup85Q8R480 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup85Q8R480 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nup85Q8R480 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Gm22697-201ENSMUST00000175194 63 ntBASIC17.11■□□□□ 0.33
Nup85Q8R480 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
Nup85Q8R480 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nup85Q8R480 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup85Q8R480 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.1■□□□□ 0.33
Nup85Q8R480 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Gm27000-201ENSMUST00000182943 842 ntBASIC17.1■□□□□ 0.33
Nup85Q8R480 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.1■□□□□ 0.33
Nup85Q8R480 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.1■□□□□ 0.33
Nup85Q8R480 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup85Q8R480 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.09■□□□□ 0.33
Nup85Q8R480 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nup85Q8R480 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup85Q8R480 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup85Q8R480 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup85Q8R480 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup85Q8R480 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup85Q8R480 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup85Q8R480 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms