Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Mir1668-201ENSMUST00000184114 107 ntBASIC15.41■□□□□ 0.06
Rfc3Q8R323 Gm8969-201ENSMUST00000199694 526 ntBASIC15.41■□□□□ 0.06
Rfc3Q8R323 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rfc3Q8R323 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Gm14859-201ENSMUST00000117752 357 ntBASIC15.4■□□□□ 0.06
Rfc3Q8R323 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc3Q8R323 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gm7284-201ENSMUST00000131667 944 ntBASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc3Q8R323 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.38■□□□□ 0.05
Rfc3Q8R323 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.38■□□□□ 0.05
Rfc3Q8R323 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Gm25016-201ENSMUST00000158399 131 ntBASIC15.38■□□□□ 0.05
Rfc3Q8R323 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.38■□□□□ 0.05
Rfc3Q8R323 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfc3Q8R323 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms