Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Gm43799-201ENSMUST00000201845 579 ntBASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ubqln1Q8R317 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ubqln1Q8R317 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Gm7370-201ENSMUST00000219471 767 ntBASIC15.78■□□□□ 0.12
Ubqln1Q8R317 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubqln1Q8R317 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubqln1Q8R317 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubqln1Q8R317 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms