Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gtf3c5Q8R2T8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gtf3c5Q8R2T8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c5Q8R2T8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c5Q8R2T8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf3c5Q8R2T8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c5Q8R2T8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c5Q8R2T8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms