Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Zcchc9Q8R1J3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Zcchc9Q8R1J3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.6■□□□□ 0.25
Zcchc9Q8R1J3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Olfr129-201ENSMUST00000122318 993 ntBASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.59■□□□□ 0.25
Zcchc9Q8R1J3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc9Q8R1J3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Zcchc9Q8R1J3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc9Q8R1J3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc9Q8R1J3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Zcchc9Q8R1J3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Mzt1-203ENSMUST00000227948 952 ntBASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Zcchc9Q8R1J3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zcchc9Q8R1J3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms