Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpp40Q8R1F9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rpp40Q8R1F9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpp40Q8R1F9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rpp40Q8R1F9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rpp40Q8R1F9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpp40Q8R1F9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rpp40Q8R1F9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpp40Q8R1F9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rpp40Q8R1F9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms