Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col23a1Q8K4G2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col23a1Q8K4G2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Col23a1Q8K4G2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Gm9172-201ENSMUST00000212092 954 ntBASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col23a1Q8K4G2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Gm5682-201ENSMUST00000173402 505 ntBASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col23a1Q8K4G2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col23a1Q8K4G2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Col23a1Q8K4G2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col23a1Q8K4G2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col23a1Q8K4G2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.17■□□□□ 0.82
Col23a1Q8K4G2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms