Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Mir5130-201ENSMUST00000175160 84 ntBASIC15.75■□□□□ 0.11
Clrn1Q8K445 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.75■□□□□ 0.11
Clrn1Q8K445 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.75■□□□□ 0.11
Clrn1Q8K445 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clrn1Q8K445 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clrn1Q8K445 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Gm6433-201ENSMUST00000118634 875 ntBASIC15.73■□□□□ 0.11
Clrn1Q8K445 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Clrn1Q8K445 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clrn1Q8K445 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.72■□□□□ 0.11
Clrn1Q8K445 Gm45058-201ENSMUST00000205810 766 ntBASIC15.72■□□□□ 0.11
Clrn1Q8K445 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Gm7213-201ENSMUST00000215977 950 ntBASIC15.72■□□□□ 0.11
Clrn1Q8K445 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn1Q8K445 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn1Q8K445 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn1Q8K445 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn1Q8K445 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.71■□□□□ 0.11
Clrn1Q8K445 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn1Q8K445 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clrn1Q8K445 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn1Q8K445 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms