Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pdlim5Q8CI51 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim5Q8CI51 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim5Q8CI51 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim5Q8CI51 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim5Q8CI51 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim5Q8CI51 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim5Q8CI51 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim5Q8CI51 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Gm18958-201ENSMUST00000174258 762 ntBASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Gm10812-201ENSMUST00000099864 546 ntBASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdlim5Q8CI51 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms