Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb7Q8CDY9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Mir5122-201ENSMUST00000175004 89 ntBASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb7Q8CDY9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.73■□□□□ 0.27
Pcdhb7Q8CDY9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb7Q8CDY9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms