Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rsph6aQ8CDR2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Gm43347-201ENSMUST00000200226 580 ntBASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rsph6aQ8CDR2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.66■■□□□ 1.06
Rsph6aQ8CDR2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 AC154532.1-201ENSMUST00000227860 965 ntBASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rsph6aQ8CDR2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph6aQ8CDR2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.64■■□□□ 1.06
Rsph6aQ8CDR2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rsph6aQ8CDR2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rsph6aQ8CDR2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rsph6aQ8CDR2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rsph6aQ8CDR2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm27867-201ENSMUST00000184778 125 ntBASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rsph6aQ8CDR2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rsph6aQ8CDR2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms