Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Uba3Q8C878 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uba3Q8C878 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.58■□□□□ 0.4
Uba3Q8C878 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Uba3Q8C878 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.58■□□□□ 0.4
Uba3Q8C878 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Uba3Q8C878 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Uba3Q8C878 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Uba3Q8C878 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Uba3Q8C878 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Uba3Q8C878 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Uba3Q8C878 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Uba3Q8C878 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Uba3Q8C878 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Uba3Q8C878 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Uba3Q8C878 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.56■□□□□ 0.4
Uba3Q8C878 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Uba3Q8C878 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Uba3Q8C878 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Uba3Q8C878 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.55■□□□□ 0.4
Uba3Q8C878 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Uba3Q8C878 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Uba3Q8C878 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Uba3Q8C878 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Uba3Q8C878 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.55■□□□□ 0.4
Uba3Q8C878 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.55■□□□□ 0.4
Uba3Q8C878 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.55■□□□□ 0.4
Uba3Q8C878 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Uba3Q8C878 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Uba3Q8C878 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Gm11336-201ENSMUST00000118168 334 ntBASIC17.54■□□□□ 0.4
Uba3Q8C878 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.54■□□□□ 0.4
Uba3Q8C878 Gm6659-201ENSMUST00000174752 547 ntBASIC17.54■□□□□ 0.4
Uba3Q8C878 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.54■□□□□ 0.4
Uba3Q8C878 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Uba3Q8C878 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.54■□□□□ 0.4
Uba3Q8C878 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Uba3Q8C878 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Uba3Q8C878 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms