Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15□□□□□ -0.01
Col6a6Q8C6K9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a6Q8C6K9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a6Q8C6K9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a6Q8C6K9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a6Q8C6K9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col6a6Q8C6K9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a6Q8C6K9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms