Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Gm29707-201ENSMUST00000196325 491 ntBASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nek11Q8C0Q4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Haglr-201ENSMUST00000100000 2085 ntBASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nek11Q8C0Q4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nek11Q8C0Q4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nek11Q8C0Q4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nek11Q8C0Q4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nek11Q8C0Q4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Nek11Q8C0Q4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nek11Q8C0Q4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.75■□□□□ 0.75
Nek11Q8C0Q4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nek11Q8C0Q4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nek11Q8C0Q4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms