Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trub1Q8C0D0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trub1Q8C0D0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Mir5130-201ENSMUST00000175160 84 ntBASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Gm18115-201ENSMUST00000221209 621 ntBASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Trub1Q8C0D0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Gm18959-201ENSMUST00000208954 655 ntBASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trub1Q8C0D0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trub1Q8C0D0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms