Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap1Q8BTW8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdk5rap1Q8BTW8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdk5rap1Q8BTW8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm15794-201ENSMUST00000120182 631 ntBASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm28033-201ENSMUST00000184224 96 ntBASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdk5rap1Q8BTW8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdk5rap1Q8BTW8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms