Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.73■□□□□ 0.27
Cpsf7Q8BTV2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Trmt13-210ENSMUST00000198454 880 ntBASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf7Q8BTV2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Gm12896-201ENSMUST00000118430 226 ntBASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.71■□□□□ 0.27
Cpsf7Q8BTV2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf7Q8BTV2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Cpsf7Q8BTV2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Cpsf7Q8BTV2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf7Q8BTV2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gm22240-201ENSMUST00000175225 82 ntBASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gm27275-201ENSMUST00000184318 272 ntBASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf7Q8BTV2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.68■□□□□ 0.26
Cpsf7Q8BTV2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms