Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Suds3Q8BR65 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.14■□□□□ 0.33
Suds3Q8BR65 Gm11539-201ENSMUST00000119837 557 ntBASIC17.14■□□□□ 0.33
Suds3Q8BR65 Gm13436-201ENSMUST00000120418 567 ntBASIC17.14■□□□□ 0.33
Suds3Q8BR65 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.14■□□□□ 0.33
Suds3Q8BR65 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Gm21814-202ENSMUST00000203277 873 ntBASIC17.14■□□□□ 0.33
Suds3Q8BR65 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.14■□□□□ 0.33
Suds3Q8BR65 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Odf3b-204ENSMUST00000227834 930 ntBASIC17.13■□□□□ 0.33
Suds3Q8BR65 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Suds3Q8BR65 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Suds3Q8BR65 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.11■□□□□ 0.33
Suds3Q8BR65 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Suds3Q8BR65 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Gm7889-201ENSMUST00000185591 958 ntBASIC17.1■□□□□ 0.33
Suds3Q8BR65 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms