Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Gm18669-201ENSMUST00000216049 778 ntBASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nhlrc1Q8BR37 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nhlrc1Q8BR37 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nhlrc1Q8BR37 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Gm10566-201ENSMUST00000086739 996 ntBASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.94□□□□□ -0.34
Nhlrc1Q8BR37 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Gm27742-201ENSMUST00000184667 60 ntBASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlrc1Q8BR37 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlrc1Q8BR37 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms