Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip4Q8BQP8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Gm9731-201ENSMUST00000209480 747 ntBASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip4Q8BQP8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Gm25016-201ENSMUST00000158399 131 ntBASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Gm17661-201ENSMUST00000170317 270 ntBASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Gm27389-201ENSMUST00000183622 195 ntBASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip4Q8BQP8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Gm14859-201ENSMUST00000117752 357 ntBASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip4Q8BQP8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip4Q8BQP8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms