Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VmacQ8BP01 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VmacQ8BP01 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VmacQ8BP01 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VmacQ8BP01 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VmacQ8BP01 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VmacQ8BP01 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VmacQ8BP01 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Gm9013-201ENSMUST00000132939 882 ntBASIC19.18■□□□□ 0.66
VmacQ8BP01 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.18■□□□□ 0.66
VmacQ8BP01 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VmacQ8BP01 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VmacQ8BP01 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VmacQ8BP01 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.17■□□□□ 0.66
VmacQ8BP01 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.17■□□□□ 0.66
VmacQ8BP01 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.17■□□□□ 0.66
VmacQ8BP01 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VmacQ8BP01 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.17■□□□□ 0.66
VmacQ8BP01 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VmacQ8BP01 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.16■□□□□ 0.66
VmacQ8BP01 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VmacQ8BP01 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VmacQ8BP01 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VmacQ8BP01 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VmacQ8BP01 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VmacQ8BP01 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VmacQ8BP01 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VmacQ8BP01 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VmacQ8BP01 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VmacQ8BP01 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VmacQ8BP01 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VmacQ8BP01 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.14■□□□□ 0.65
VmacQ8BP01 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.14■□□□□ 0.65
VmacQ8BP01 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.14■□□□□ 0.65
VmacQ8BP01 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VmacQ8BP01 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms