Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp1Q8BJQ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp1Q8BJQ2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp1Q8BJQ2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Gm12895-201ENSMUST00000122214 226 ntBASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp1Q8BJQ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gm28659-201ENSMUST00000188013 759 ntBASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp1Q8BJQ2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms