Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcal1Q8BJL0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 AW822252-206ENSMUST00000208904 237 ntBASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smarcal1Q8BJL0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcal1Q8BJL0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Smarcal1Q8BJL0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcal1Q8BJL0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarcal1Q8BJL0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gm6376-201ENSMUST00000209407 580 ntBASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcal1Q8BJL0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms