Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Gm12085-201ENSMUST00000119263 940 ntBASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.11■□□□□ 0.17
Rnf38Q8BI21 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf38Q8BI21 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm37025-201ENSMUST00000195159 829 ntBASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf38Q8BI21 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
Rnf38Q8BI21 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf38Q8BI21 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms