Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim23Q8BGX0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Gm29707-201ENSMUST00000196325 491 ntBASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.09■□□□□ 0.17
Trim23Q8BGX0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trim23Q8BGX0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim23Q8BGX0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.08■□□□□ 0.16
Trim23Q8BGX0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim23Q8BGX0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Mir770-201ENSMUST00000103252 94 ntBASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Gm18421-201ENSMUST00000204122 625 ntBASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim23Q8BGX0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim23Q8BGX0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms