Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npas4Q8BGD7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Gm37935-201ENSMUST00000192012 982 ntBASIC17.53■□□□□ 0.4
Npas4Q8BGD7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Npas4Q8BGD7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.52■□□□□ 0.4
Npas4Q8BGD7 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.52■□□□□ 0.4
Npas4Q8BGD7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas4Q8BGD7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Gm12350-201ENSMUST00000121208 462 ntBASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Gm25745-201ENSMUST00000174945 133 ntBASIC17.51■□□□□ 0.39
Npas4Q8BGD7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.51■□□□□ 0.39
Npas4Q8BGD7 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npas4Q8BGD7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Npas4Q8BGD7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms