Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpped1Q8BFS6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpped1Q8BFS6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpped1Q8BFS6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpped1Q8BFS6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cpped1Q8BFS6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpped1Q8BFS6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Gm13474-201ENSMUST00000122466 815 ntBASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpped1Q8BFS6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpped1Q8BFS6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpped1Q8BFS6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Gm13216-201ENSMUST00000117145 591 ntBASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cpped1Q8BFS6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpped1Q8BFS6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms