Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trnp1Q80ZI1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm25911-201ENSMUST00000157621 56 ntBASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm10576-201ENSMUST00000191927 825 ntBASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Gm10175-201ENSMUST00000086013 645 ntBASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trnp1Q80ZI1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Gm7222-201ENSMUST00000117512 906 ntBASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Auts2-212ENSMUST00000178555 309 ntBASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Gm8655-201ENSMUST00000221159 852 ntBASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trnp1Q80ZI1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Gm26308-201ENSMUST00000157768 69 ntBASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.77■□□□□ 0.6
Trnp1Q80ZI1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trnp1Q80ZI1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trnp1Q80ZI1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trnp1Q80ZI1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Trnp1Q80ZI1 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trnp1Q80ZI1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms