Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nucks1Q80XU3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.83■□□□□ 0.45
Nucks1Q80XU3 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.83■□□□□ 0.45
Nucks1Q80XU3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nucks1Q80XU3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nucks1Q80XU3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nucks1Q80XU3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nucks1Q80XU3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nucks1Q80XU3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nucks1Q80XU3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nucks1Q80XU3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms