Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrrtm4Q80XG9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrrtm4Q80XG9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrrtm4Q80XG9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.22■□□□□ 0.19
Lrrtm4Q80XG9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms