Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm18206-201ENSMUST00000207027 926 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Gm6376-201ENSMUST00000209407 580 ntBASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp6nlQ80XC3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp6nlQ80XC3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp6nlQ80XC3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp6nlQ80XC3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp6nlQ80XC3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp6nlQ80XC3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp6nlQ80XC3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp6nlQ80XC3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp6nlQ80XC3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp6nlQ80XC3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp6nlQ80XC3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms