Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim62Q80V85 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim62Q80V85 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim62Q80V85 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim62Q80V85 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim62Q80V85 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim62Q80V85 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim62Q80V85 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim62Q80V85 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim62Q80V85 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim62Q80V85 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim62Q80V85 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.26■□□□□ 0.35
Trim62Q80V85 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Gm18421-201ENSMUST00000204122 625 ntBASIC17.26■□□□□ 0.35
Trim62Q80V85 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim62Q80V85 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.26■□□□□ 0.35
Trim62Q80V85 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim62Q80V85 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.25■□□□□ 0.35
Trim62Q80V85 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.25■□□□□ 0.35
Trim62Q80V85 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Trim62Q80V85 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim62Q80V85 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim62Q80V85 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim62Q80V85 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim62Q80V85 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim62Q80V85 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim62Q80V85 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim62Q80V85 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim62Q80V85 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.23■□□□□ 0.35
Trim62Q80V85 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim62Q80V85 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trim62Q80V85 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim62Q80V85 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim62Q80V85 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim62Q80V85 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim62Q80V85 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim62Q80V85 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim62Q80V85 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.22■□□□□ 0.35
Trim62Q80V85 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim62Q80V85 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim62Q80V85 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim62Q80V85 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms