Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp8Q80U87 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp8Q80U87 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Usp8Q80U87 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp8Q80U87 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Gm37025-201ENSMUST00000195159 829 ntBASIC16.73■□□□□ 0.27
Usp8Q80U87 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Usp8Q80U87 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp8Q80U87 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Usp8Q80U87 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Usp8Q80U87 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp8Q80U87 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp8Q80U87 Gm13168-201ENSMUST00000121771 632 ntBASIC16.72■□□□□ 0.27
Usp8Q80U87 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.72■□□□□ 0.27
Usp8Q80U87 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp8Q80U87 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp8Q80U87 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Usp8Q80U87 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp8Q80U87 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.71■□□□□ 0.27
Usp8Q80U87 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.71■□□□□ 0.27
Usp8Q80U87 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.71■□□□□ 0.27
Usp8Q80U87 Gm17661-201ENSMUST00000170317 270 ntBASIC16.71■□□□□ 0.27
Usp8Q80U87 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.71■□□□□ 0.27
Usp8Q80U87 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp8Q80U87 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp8Q80U87 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
Usp8Q80U87 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Usp8Q80U87 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp8Q80U87 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp8Q80U87 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Usp8Q80U87 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Usp8Q80U87 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp8Q80U87 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms