Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh8Q7TSK3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh8Q7TSK3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh8Q7TSK3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh8Q7TSK3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh8Q7TSK3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh8Q7TSK3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh8Q7TSK3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh8Q7TSK3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms