Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.24■□□□□ 0.19
Scn4bQ7M729 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Gm11539-201ENSMUST00000119837 557 ntBASIC16.24■□□□□ 0.19
Scn4bQ7M729 Gm13436-201ENSMUST00000120418 567 ntBASIC16.24■□□□□ 0.19
Scn4bQ7M729 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn4bQ7M729 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Gm15565-201ENSMUST00000118890 427 ntBASIC16.23■□□□□ 0.19
Scn4bQ7M729 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Gm7370-201ENSMUST00000219471 767 ntBASIC16.23■□□□□ 0.19
Scn4bQ7M729 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn4bQ7M729 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.22■□□□□ 0.19
Scn4bQ7M729 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Gm2274-201ENSMUST00000184539 609 ntBASIC16.22■□□□□ 0.19
Scn4bQ7M729 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn4bQ7M729 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn4bQ7M729 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms