Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 Gm9727-201ENSMUST00000161387 555 ntBASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nup188Q6ZQH8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.77■□□□□ 0.75
Nup188Q6ZQH8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Nup188Q6ZQH8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nup188Q6ZQH8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nup188Q6ZQH8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.76■□□□□ 0.75
Nup188Q6ZQH8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Gm36967-201ENSMUST00000193814 266 ntBASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup188Q6ZQH8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup188Q6ZQH8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup188Q6ZQH8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup188Q6ZQH8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms