Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Gm8655-201ENSMUST00000221159 852 ntBASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn10aQ6QIY3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Mir6404-201ENSMUST00000183699 94 ntBASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Mir8117-201ENSMUST00000184773 107 ntBASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Gm10576-201ENSMUST00000191927 825 ntBASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn10aQ6QIY3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scn10aQ6QIY3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn10aQ6QIY3 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn10aQ6QIY3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn10aQ6QIY3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms