Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.02□□□□□ -0.17
Rif1Q6PR54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Gm6007-201ENSMUST00000208170 823 ntBASIC14.02□□□□□ -0.17
Rif1Q6PR54 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Grk6-207ENSMUST00000225925 2769 ntBASIC14.02□□□□□ -0.17
Rif1Q6PR54 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rif1Q6PR54 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm9794-201ENSMUST00000202370 423 ntBASIC14.01□□□□□ -0.17
Rif1Q6PR54 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.01□□□□□ -0.17
Rif1Q6PR54 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rif1Q6PR54 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Gm12490-201ENSMUST00000120255 560 ntBASIC14□□□□□ -0.17
Rif1Q6PR54 Mir1895-201ENSMUST00000122615 79 ntBASIC14□□□□□ -0.17
Rif1Q6PR54 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rif1Q6PR54 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rif1Q6PR54 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14□□□□□ -0.17
Rif1Q6PR54 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14□□□□□ -0.17
Rif1Q6PR54 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Nrn1-204ENSMUST00000224323 1779 ntBASIC14□□□□□ -0.17
Rif1Q6PR54 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14□□□□□ -0.17
Rif1Q6PR54 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14□□□□□ -0.17
Rif1Q6PR54 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rif1Q6PR54 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rif1Q6PR54 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Grk6-206ENSMUST00000224995 2971 ntBASIC13.99□□□□□ -0.17
Rif1Q6PR54 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms