Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcc2Q6PDG5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcc2Q6PDG5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Gm18032-201ENSMUST00000222541 538 ntBASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcc2Q6PDG5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Gm10013-201ENSMUST00000106074 672 ntBASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Gm22697-201ENSMUST00000175194 63 ntBASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Gm18101-201ENSMUST00000215769 548 ntBASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcc2Q6PDG5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smarcc2Q6PDG5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms