Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd3Q6P9Z1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Gm37856-201ENSMUST00000191634 999 ntBASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd3Q6P9Z1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Dancr-204ENSMUST00000132389 2347 ntBASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcd3Q6P9Z1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcd3Q6P9Z1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms