Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 AA414768-201ENSMUST00000121924 1257 ntBASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.95■□□□□ 0.46
Retreg2Q6NS82 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Gm6345-202ENSMUST00000180900 204 ntBASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Gm18101-201ENSMUST00000215769 548 ntBASIC17.94■□□□□ 0.46
Retreg2Q6NS82 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retreg2Q6NS82 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retreg2Q6NS82 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retreg2Q6NS82 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Gm7370-201ENSMUST00000219471 767 ntBASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retreg2Q6NS82 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg2Q6NS82 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retreg2Q6NS82 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms