Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm8655-201ENSMUST00000221159 852 ntBASIC13.81□□□□□ -0.2
Col7a1Q63870 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.81□□□□□ -0.2
Col7a1Q63870 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col7a1Q63870 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.8□□□□□ -0.2
Col7a1Q63870 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm13365-201ENSMUST00000121188 973 ntBASIC13.8□□□□□ -0.2
Col7a1Q63870 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm27306-201ENSMUST00000183970 107 ntBASIC13.8□□□□□ -0.2
Col7a1Q63870 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Mir449b-201ENSMUST00000104833 80 ntBASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.8□□□□□ -0.2
Col7a1Q63870 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col7a1Q63870 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col7a1Q63870 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col7a1Q63870 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.79□□□□□ -0.2
Col7a1Q63870 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col7a1Q63870 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.79□□□□□ -0.2
Col7a1Q63870 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.79□□□□□ -0.2
Col7a1Q63870 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.79□□□□□ -0.2
Col7a1Q63870 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.79□□□□□ -0.2
Col7a1Q63870 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.79□□□□□ -0.2
Col7a1Q63870 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col7a1Q63870 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col7a1Q63870 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm6912-201ENSMUST00000117218 544 ntBASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.78□□□□□ -0.2
Col7a1Q63870 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm27301-201ENSMUST00000184012 127 ntBASIC13.78□□□□□ -0.2
Col7a1Q63870 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.78□□□□□ -0.2
Col7a1Q63870 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col7a1Q63870 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col7a1Q63870 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.77□□□□□ -0.2
Col7a1Q63870 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col7a1Q63870 Gm6007-201ENSMUST00000208170 823 ntBASIC13.77□□□□□ -0.2
Col7a1Q63870 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.77□□□□□ -0.2
Col7a1Q63870 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col7a1Q63870 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col7a1Q63870 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col7a1Q63870 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col7a1Q63870 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Col7a1Q63870 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Gm9899-201ENSMUST00000065519 555 ntBASIC13.77□□□□□ -0.21
Col7a1Q63870 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col7a1Q63870 Gm11745-201ENSMUST00000121669 448 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms