Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.33□□□□□ -0.12
Vamp1Q62442 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.33□□□□□ -0.12
Vamp1Q62442 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.33□□□□□ -0.12
Vamp1Q62442 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.33□□□□□ -0.12
Vamp1Q62442 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vamp1Q62442 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Gm45417-201ENSMUST00000209533 758 ntBASIC14.32□□□□□ -0.12
Vamp1Q62442 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.32□□□□□ -0.12
Vamp1Q62442 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.32□□□□□ -0.12
Vamp1Q62442 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vamp1Q62442 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.31□□□□□ -0.12
Vamp1Q62442 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vamp1Q62442 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Vamp1Q62442 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vamp1Q62442 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.3□□□□□ -0.12
Vamp1Q62442 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.3□□□□□ -0.12
Vamp1Q62442 Gm38285-201ENSMUST00000192928 922 ntBASIC14.3□□□□□ -0.12
Vamp1Q62442 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.3□□□□□ -0.12
Vamp1Q62442 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.3□□□□□ -0.12
Vamp1Q62442 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.3□□□□□ -0.12
Vamp1Q62442 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vamp1Q62442 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms