Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.1■□□□□ 0.33
Six1Q62231 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Six1Q62231 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.1■□□□□ 0.33
Six1Q62231 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.1■□□□□ 0.33
Six1Q62231 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Six1Q62231 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six1Q62231 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Six1Q62231 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Six1Q62231 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Six1Q62231 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.09■□□□□ 0.33
Six1Q62231 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.09■□□□□ 0.33
Six1Q62231 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.09■□□□□ 0.33
Six1Q62231 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Six1Q62231 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six1Q62231 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Six1Q62231 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six1Q62231 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six1Q62231 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six1Q62231 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six1Q62231 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six1Q62231 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.08■□□□□ 0.32
Six1Q62231 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Six1Q62231 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Six1Q62231 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six1Q62231 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Six1Q62231 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Six1Q62231 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Actl10-202ENSMUST00000226583 1501 ntBASIC17.07■□□□□ 0.32
Six1Q62231 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.07■□□□□ 0.32
Six1Q62231 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.07■□□□□ 0.32
Six1Q62231 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.07■□□□□ 0.32
Six1Q62231 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Phf7-203ENSMUST00000226565 1971 ntBASIC17.07■□□□□ 0.32
Six1Q62231 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
Six1Q62231 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six1Q62231 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.06■□□□□ 0.32
Six1Q62231 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.06■□□□□ 0.32
Six1Q62231 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.06■□□□□ 0.32
Six1Q62231 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.06■□□□□ 0.32
Six1Q62231 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six1Q62231 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Six1Q62231 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms