Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.61■□□□□ 0.73
Scn9aQ62205 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn9aQ62205 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Scn9aQ62205 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn9aQ62205 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.6■□□□□ 0.73
Scn9aQ62205 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.6■□□□□ 0.73
Scn9aQ62205 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Scn9aQ62205 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn9aQ62205 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn9aQ62205 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn9aQ62205 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn9aQ62205 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn9aQ62205 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Scn9aQ62205 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Scn9aQ62205 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn9aQ62205 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scn9aQ62205 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn9aQ62205 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.58■□□□□ 0.72
Scn9aQ62205 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn9aQ62205 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn9aQ62205 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn9aQ62205 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.57■□□□□ 0.72
Scn9aQ62205 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Gm26308-201ENSMUST00000157768 69 ntBASIC19.57■□□□□ 0.72
Scn9aQ62205 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Scn9aQ62205 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.57■□□□□ 0.72
Scn9aQ62205 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn9aQ62205 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Scn9aQ62205 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn9aQ62205 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.56■□□□□ 0.72
Scn9aQ62205 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn9aQ62205 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scn9aQ62205 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn9aQ62205 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn9aQ62205 Mir3113-201ENSMUST00000175478 76 ntBASIC19.55■□□□□ 0.72
Scn9aQ62205 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Scn9aQ62205 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.55■□□□□ 0.72
Scn9aQ62205 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn9aQ62205 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn9aQ62205 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn9aQ62205 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Scn9aQ62205 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn9aQ62205 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn9aQ62205 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Scn9aQ62205 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn9aQ62205 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn9aQ62205 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Scn9aQ62205 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn9aQ62205 Gm15920-201ENSMUST00000118998 402 ntBASIC19.53■□□□□ 0.72
Scn9aQ62205 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.53■□□□□ 0.72
Scn9aQ62205 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn9aQ62205 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms