Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.45■□□□□ 0.54
Ecm1Q61508 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.44■□□□□ 0.54
Ecm1Q61508 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.44■□□□□ 0.54
Ecm1Q61508 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Mir5126-201ENSMUST00000175513 77 ntBASIC18.44■□□□□ 0.54
Ecm1Q61508 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.44■□□□□ 0.54
Ecm1Q61508 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.44■□□□□ 0.54
Ecm1Q61508 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ecm1Q61508 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.43■□□□□ 0.54
Ecm1Q61508 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Ecm1Q61508 Gm7506-201ENSMUST00000207758 815 ntBASIC18.43■□□□□ 0.54
Ecm1Q61508 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ecm1Q61508 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ecm1Q61508 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Gm25990-201ENSMUST00000102440 86 ntBASIC18.42■□□□□ 0.54
Ecm1Q61508 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.42■□□□□ 0.54
Ecm1Q61508 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Gm25925-201ENSMUST00000158314 306 ntBASIC18.42■□□□□ 0.54
Ecm1Q61508 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ecm1Q61508 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ecm1Q61508 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm4535-201ENSMUST00000182274 558 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.41■□□□□ 0.54
Ecm1Q61508 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm5364-201ENSMUST00000216789 889 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Ecm1Q61508 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm10355-201ENSMUST00000097146 517 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.41■□□□□ 0.54
Ecm1Q61508 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ecm1Q61508 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ecm1Q61508 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.4■□□□□ 0.54
Ecm1Q61508 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ecm1Q61508 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ecm1Q61508 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 Gm13418-201ENSMUST00000119097 944 ntBASIC18.4■□□□□ 0.54
Ecm1Q61508 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ecm1Q61508 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.4■□□□□ 0.54
Ecm1Q61508 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms